BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029F03LP1|AL429081
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1634 1738 0.0
>3x_Contig1634
Length = 14275
Score = 1738 bits (876), Expect = 0.0
Identities = 892/897 (99%), Gaps = 1/897 (0%)
Strand = Plus / Plus
Query: 1 gatcgcagcatgaaaacaatgtcacaagcacatcgaatctgaatgtcaatggnactcatt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5420 gatcgcagcatgaaaacaatgtcacaagcacatcgaatctgaatgtcaatgg-actcatt 5478
Query: 61 gaccctaatactagaaatgaggtaccagaacgaagaacgagtttggatcctagaatgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5479 gaccctaatactagaaatgaggtaccagaacgaagaacgagtttggatcctagaatgaat 5538
Query: 121 gattatgatctgctgaatttagccgcagaacaacccacaaattttcgtcaaatgagagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5539 gattatgatctgctgaatttagccgcagaacaacccacaaattttcgtcaaatgagagga 5598
Query: 181 agactgttatcagagaataaccaagagaactcgcgacccccagtacctaatcttttgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5599 agactgttatcagagaataaccaagagaactcgcgacccccagtacctaatcttttgggt 5658
Query: 241 aaggctcctcttaacacggattcacataaggttggaccacaactccctaacatgtctcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5659 aaggctcctcttaacacggattcacataaggttggaccacaactccctaacatgtctcaa 5718
Query: 301 ctcacaaacgcagattcaatgttattcaatggaaatggacaagctcaccctcaagcacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5719 ctcacaaacgcagattcaatgttattcaatggaaatggacaagctcaccctcaagcacct 5778
Query: 361 tccggttccttttctgatagcmattctcggatcgttgttcaaccaatgggaagttctccg 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5779 tccggttccttttctgatagcaattctcggatcgttgttcaaccaatgggaagttctccg 5838
Query: 421 cgtggccaaacaagcgataaagtcacacaggtatccatacagcccacagaacctccttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5839 cgtggccaaacaagcgataaagtcacacaggtatccatacagcccacagaacctccttcc 5898
Query: 481 atgggagttcctgtnctaccacctctaccaactttgccagttagatcaactacttctacg 540
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5899 atgggagttcctgtactaccacctctaccaactttgccagtgagatcaactacttctacg 5958
Query: 541 atgtcaccgaatttacctcaaccaccgcctatccatgatcctagaagaagggagccagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5959 atgtcaccgaatttacctcaaccaccgcctatccatgatcctagaagaaggaagccagag 6018
Query: 601 gtatcaccgtttttacccaagaagaattttaagaatgttctaccgaagaaaagagcacac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6019 gtatcaccgtttttacccaagaagaattttaagaatgttctaccgaagaaaagagcacac 6078
Query: 661 tccaacggcaacgcacaaaatgtgcattcagaaatcaacgggaaccatgactctggaacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6079 tccaacggcaacgcacaaaatgtgcattcagaaatcaacgggaaccatgactctggaacc 6138
Query: 721 ttaccagcaccttcacccatatccaatgtgcaggtatcgccttccccggctataatgaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6139 ttaccagcaccttcacccatatccaatgtgcaggtatcgccttccccggctataatgaat 6198
Query: 781 tcaaataatgtaccgcctcctaatgactctcttaattctgacgatttgatcgacttgacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6199 tcaaataatgtaccgcctcctaatgactctcttaattctgacgatttgatcgacttgacc 6258
Query: 841 tccgattaacattctacaaggattacgttaagttttagtatgaactgcataaagtat 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6259 tccgattaacattctacaaggattacgttaagttttagtatgaactgcataaagtat 6315
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5147
Number of Sequences: 1807
Number of extensions: 5147
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)